Publications
Articles
Ancillary study management systems: a review of needs
(2013). BMC Med Inform Decis Mak, 13 (5), 1-17. http://dx.doi.org/10.1186/1472-6947-13-5, PMID: 23294514, PMCID: PMC3564696
Nelson EK, Piehler B, Rauch A, Ramsay S, Holman D, Asare S, Asare A, Igra M
[Reprint] [PubMed]
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Nelson EK, Piehler B, Rauch A, Ramsay S, Holman D, Asare S, Asare A, Igra M (2013). Ancillary study management systems: a review of needs. BMC Med Inform Decis Mak, 13 (5), 1-17.
Complete immunosuppression withdrawal and subsequent allograft function among pediatric recipients of parental living donor liver transplants
(2012). JAMA, 307 (3), 283-93. http://dx.doi.org/10.1001/jama.2011.2014, PMID: 22253395
Feng S, Ekong UD, Lobritto SJ, Demetris AJ, Roberts JP, Rosenthal P, Alonso EM, Philogene MC, Ikle D, Poole KM, Bridges ND, Turka LA, Tchao NK
[Reprint] [PubMed]
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Feng S, Ekong UD, Lobritto SJ, Demetris AJ, Roberts JP, Rosenthal P, Alonso EM, Philogene MC, Ikle D, Poole KM, Bridges ND, Turka LA, Tchao NK (2012). Complete immunosuppression withdrawal and subsequent allograft function among pediatric recipients of parental living donor liver transplants. JAMA, 307 (3), 283-93.
Circulating angiopoietin-2 as a biomarker in ANCA-associated Vasculitis
(2012). PLoS One, 7 (1), e30197. http://dx.doi.org/10.1371/journal.pone.0030197, PMID: 22279570, PMCID: 3261176
Monach PA, Kumpers P, Lukasz A, Tomasson G, Specks U, Stone JH, Cuthbertson D, Krischer J, Carette S, Ding L, Hoffman GS, Ikle D, Kallenberg CG, Khalidi NA, Langford CA, Seo P, St. Clair EW, Spiera R, Tchao N, Ytterberg SR, Haubitz M, Merkel PA
[Reprint] [PubMed]
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Monach PA, Kumpers P, Lukasz A, Tomasson G, Specks U, Stone JH, Cuthbertson D, Krischer J, Carette S, Ding L, Hoffman GS, Ikle D, Kallenberg CG, Khalidi NA, Langford CA, Seo P, St. Clair EW, Spiera R, Tchao N, Ytterberg SR, Haubitz M, Merkel PA (2012). Circulating angiopoietin-2 as a biomarker in ANCA-associated Vasculitis. PLoS One, 7 (1), e30197.
Randomized controlled trial of atorvastatin in clinically isolated syndrome
(2012). Neurology, 78 (15), 1171-8. http://dx.doi.org/10.1212/WNL.0b013e31824f7fdd, PMID: 22459680, PMCID: PMC3320055
Waubant E, Pelletier D, Mass M, Cohen JA, Kita M, Cross A, Bar-Or A, Vollmer T, Racke M, Stüve O, Schwid S, Goodman A, Kachuck N, Preiningerova J, Weinstock-Guttman B, Calabresi PA, Miller A, Mokhtarani M, Ikle D, Murphy S, Kopetskie H, Ding L, Rosenberg E, Spencer C, Zamvil SS, ITN020AI Study Management Team, ITN STAyCIS Study Group
[Reprint] [PubMed]
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Waubant E, Pelletier D, Mass M, Cohen JA, Kita M, Cross A, Bar-Or A, Vollmer T, Racke M, Stüve O, Schwid S, Goodman A, Kachuck N, Preiningerova J, Weinstock-Guttman B, Calabresi PA, Miller A, Mokhtarani M, Ikle D, Murphy S, Kopetskie H, Ding L, Rosenberg E, Spencer C, Zamvil SS, ITN020AI Study Management Team, ITN STAyCIS Study Group (2012). Randomized controlled trial of atorvastatin in clinically isolated syndrome. Neurology, 78 (15), 1171-8.
Rapamycin/IL-2 combination therapy in Type 1 Diabetes
(2012). Diabetes, 61 (9), 2340-8. , PMID: 22721971, PMCID: PMC3425404
Long SA, Rieck M, Sanda S, Bollyky JB, Samuels PL, Goland R, Ahmann A, Rabinovitch A, Aggarwal S, Phippard D, Turka LA, Ehlers MR, Bianchine PJ, Boyle KD, Adah SA, Bluestone JA, Buckner JH, Greenbaum CJ, Diabetes TrialNet and the Immune Tolerance Network
[Reprint] [PubMed]
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Long SA, Rieck M, Sanda S, Bollyky JB, Samuels PL, Goland R, Ahmann A, Rabinovitch A, Aggarwal S, Phippard D, Turka LA, Ehlers MR, Bianchine PJ, Boyle KD, Adah SA, Bluestone JA, Buckner JH, Greenbaum CJ, Diabetes TrialNet and the Immune Tolerance Network (2012). Rapamycin/IL-2 combination therapy in Type 1 Diabetes. Diabetes, 61 (9), 2340-8.
Optimisation of grass pollen nasal allergen challenge for assessment of clinical and immunological outcomes
(2012). J Immunol Methods, 384 (1-2), 25-31. , PMID: 22759401
Scadding GW, Calderon MA, Bellido V, Koed GK, Nielsen NC, Lund K, Togias A, Phippard D, Turka LA, Hansel TT, Durham SR, Wurtzen PA
[Reprint] [PubMed]
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Scadding GW, Calderon MA, Bellido V, Koed GK, Nielsen NC, Lund K, Togias A, Phippard D, Turka LA, Hansel TT, Durham SR, Wurtzen PA (2012). Optimisation of grass pollen nasal allergen challenge for assessment of clinical and immunological outcomes. J Immunol Methods, 384 (1-2), 25-31.
Identifying infants at high risk of peanut allergy: The Learning Early About Peanut Allergy (LEAP) screening study
(2012). J Allergy Clin Immunol, 131 (1), 135-143. , PMID: 23174658
Du Toit G, Roberts G, Sayre PH, Plaut M, Bahnson HT, Mitchell H, Radulovic S, Chan S, Fox A, Turcanu V, Lack G
[Reprint] [PubMed]
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Du Toit G, Roberts G, Sayre PH, Plaut M, Bahnson HT, Mitchell H, Radulovic S, Chan S, Fox A, Turcanu V, Lack G (2012). Identifying infants at high risk of peanut allergy: The Learning Early About Peanut Allergy (LEAP) screening study. J Allergy Clin Immunol, 131 (1), 135-143.
QUAliFiER: An automated pipeline for quality assessment of gated flow cytometry data
(2012). BMC Bioinformatics, Sep (13), 252. , PMID: 23020243, PMCID: 3499158
Finak G, Jiang W, Pardo J, Asare A, Gottardo R
[PubMed]
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Finak G, Jiang W, Pardo J, Asare A, Gottardo R (2012). QUAliFiER: An automated pipeline for quality assessment of gated flow cytometry data. BMC Bioinformatics, Sep (13), 252.
Functional rather than immunoreactive levels of IgG4 correlate closely with clinical response to grass pollen immunotherapy
(2012). Allergy, 62 (2), 217-26. http://dx.doi.org/10.1111/j.1398-9995.2011.02745.x, PMID: 22077562
Shamji MH, Ljorring C, Francis JN, Calderon MA, Larché M, Kimber I, Frew AJ, Ipsen H, Lund K, Wurtzen PA, Durham SR
[Reprint] [PubMed]
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Shamji MH, Ljorring C, Francis JN, Calderon MA, Larché M, Kimber I, Frew AJ, Ipsen H, Lund K, Wurtzen PA, Durham SR (2012). Functional rather than immunoreactive levels of IgG4 correlate closely with clinical response to grass pollen immunotherapy. Allergy, 62 (2), 217-26.
Donor-specific indirect pathway analysis reveals a B-cell-independent signature which reflects outcomes in kidney transplant recipients
(2012). Am J Transplant., 12 (3), 640-8. http://dx.doi.org/10.1111/j.1600-6143.2011.03869, PMID: 22151236, PMCID: PMC3374729
Haynes LD, Jankowska-Gan E, Sheka A, Keller MR, Hernandez-Fuentes MP, Lechler RI, Seyfert-Margolis V, Turka LA, Newell KA, Burlingham WJ
[Reprint] [PubMed]
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Haynes LD, Jankowska-Gan E, Sheka A, Keller MR, Hernandez-Fuentes MP, Lechler RI, Seyfert-Margolis V, Turka LA, Newell KA, Burlingham WJ (2012). Donor-specific indirect pathway analysis reveals a B-cell-independent signature which reflects outcomes in kidney transplant recipients. Am J Transplant., 12 (3), 640-8.
Long term tolerance after allergen immunotherapy is accompanied by selective persistence of blocking antibodies
(2011). J Allergy Clin Immunol, 127 (2), 509-16. http://dx.doi.org/10.1016/j.jaci.2010.12.1080, PMID: 21281875
James LK, Shamji MH, Walker SM, Wilson DR, Wachholz PA, Francis JN, Jacobson MR, Kimber I, Till SJ, Durham, SR
[Reprint] [PubMed]
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James LK, Shamji MH, Walker SM, Wilson DR, Wachholz PA, Francis JN, Jacobson MR, Kimber I, Till SJ, Durham, SR (2011). Long term tolerance after allergen immunotherapy is accompanied by selective persistence of blocking antibodies. J Allergy Clin Immunol, 127 (2), 509-16.
Acute renal endothelial injury during marrow recovery in a cohort of combined kidney and bone marrow allografts
(2011). Am J Transplant, 11 (7), 1464-77. http://dx.doi.org/10.1111/j.1600-6143.2011.03572.x, PMID: 21668634, PMCID: PMC3128680
Farris AB, Taheri D, Kawai T, Fazlollahi L, Wong W, Tolkoff-Rubin N, Spitzer TR, Iafrate AJ, Preffer FI, LoCascio SA, Sprangers B, Saidman S, Smith RN, Cosimi AB, Sykes M, Sachs DH, Colvin RB
[Reprint] [PubMed]
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Farris AB, Taheri D, Kawai T, Fazlollahi L, Wong W, Tolkoff-Rubin N, Spitzer TR, Iafrate AJ, Preffer FI, LoCascio SA, Sprangers B, Saidman S, Smith RN, Cosimi AB, Sykes M, Sachs DH, Colvin RB (2011). Acute renal endothelial injury during marrow recovery in a cohort of combined kidney and bone marrow allografts. Am J Transplant, 11 (7), 1464-77.
Increased frequencies of myelin oligodendrocyte glycoprotein/MHC Class II-binding CD4 cells in patients with multiple sclerosis
(2011). J Immunol, 187 (2), 1039-46. http://dx.doi.org/10.4049/jimmunol.1001543, PMID: 21653833, PMCID: PMC3131477
Radassi K, Kent SC, Yang J, Bourcier K, Bradshaw EM, Seyfert-Margolis V, Nepom GT, Kwok WW, Hafler DA
[Reprint] [PubMed]
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Radassi K, Kent SC, Yang J, Bourcier K, Bradshaw EM, Seyfert-Margolis V, Nepom GT, Kwok WW, Hafler DA (2011). Increased frequencies of myelin oligodendrocyte glycoprotein/MHC Class II-binding CD4 cells in patients with multiple sclerosis. J Immunol, 187 (2), 1039-46.
Design of the Rituximab in ANCA-associated Vasculitis (RAVE) Trial
(2011). The Open Arthritis Journal, 4 (1), 1-18.
Specks U, Merkel PA, Hoffman GS, Langford CA, Spiera R, Seo P, Kallenberg CGM, St. Clair EW, Ding L, Webber L, Mokhtarani M, Tchao NK, Sayre PH, Seyfert-Margolis V, Ikle D, Brunetta P, Zhang D, Sejismundo L, Mueller M, Stone JH
[Reprint]
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Specks U, Merkel PA, Hoffman GS, Langford CA, Spiera R, Seo P, Kallenberg CGM, St. Clair EW, Ding L, Webber L, Mokhtarani M, Tchao NK, Sayre PH, Seyfert-Margolis V, Ikle D, Brunetta P, Zhang D, Sejismundo L, Mueller M, Stone JH (2011). Design of the Rituximab in ANCA-associated Vasculitis (RAVE) Trial. The Open Arthritis Journal, 4 (1), 1-18.
Circulating markers of vascular injury and angiogenesis in Antineutrophil Cytoplasmic Antibody-Associated Vasculitis
(2011). Arthritis Rheum, 36 (12), 3988-97. http://dx.doi.org/10.1002/art.30615, PMID: 21953143, PMCID: PMC3227746
Monach PA, Tomasson G, Specks U, Stone JH, Cuthbertson D, Krischer J, Ding L, Fervenza FC, Fessler BJ, Hoffman GS, Ikle D, Kallenberg CG, Langford CA, Mueller M, Seo P, St. Clair EW, Spiera R, Tchao N, Ytterberg SR, Gu YZ, Snyder RD, Merkel PA
[Reprint] [PubMed]
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Monach PA, Tomasson G, Specks U, Stone JH, Cuthbertson D, Krischer J, Ding L, Fervenza FC, Fessler BJ, Hoffman GS, Ikle D, Kallenberg CG, Langford CA, Mueller M, Seo P, St. Clair EW, Spiera R, Tchao N, Ytterberg SR, Gu YZ, Snyder RD, Merkel PA (2011). Circulating markers of vascular injury and angiogenesis in Antineutrophil Cytoplasmic Antibody-Associated Vasculitis. Arthritis Rheum, 36 (12), 3988-97.
Translational studies in hematopoietic cell transplantation: treatment of hematologic malignancies as a stepping stone to tolerance induction
(2011). Semin Immunol, 23 (4), 273-81. http://dx.doi.org/10.1016/j.smim.2011.05.001, PMID: 21705229, PMCID: PMC3201788
Strober S, Spitzer TR, Lowsky R, Sykes M
[Reprint] [PubMed]
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Strober S, Spitzer TR, Lowsky R, Sykes M (2011). Translational studies in hematopoietic cell transplantation: treatment of hematologic malignancies as a stepping stone to tolerance induction. Semin Immunol, 23 (4), 273-81.
Immuno-intervention for the induction of transplantation tolerance through mixed chimerism
(2011). Semin Immunol, 23 (3), 165-73. http://dx.doi.org/10.1016/j.smim.2011.07.001, PMID: 21839648, PMCID: PMC3178004
Sachs DH, Sykes M, Kawai T, Cosimi AB
[Reprint] [PubMed]
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Sachs DH, Sykes M, Kawai T, Cosimi AB (2011). Immuno-intervention for the induction of transplantation tolerance through mixed chimerism. Semin Immunol, 23 (3), 165-73.
Mechanisms of donor-specific tolerance in recipients of haploidentical combined bone marrow/kidney transplantation
(2011). Am J Transplant, 11 (6), 1236-47. http://dx.doi.org/10.1111/j.1600-6143.2011.03566.x, PMID: 21645255, PMCID: PMC3140222
Andreola G, Chittenden M, Shaffer J, Cosimi AB, Kawai T, Cotter P, LoCascio SA, Morokata T, Dey BR, Tolkoff-Rubin NT, Preffer F, Bonnefoix T, Kattleman K, Spitzer TR, Sachs DH, Sykes M
[Reprint] [PubMed]
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Andreola G, Chittenden M, Shaffer J, Cosimi AB, Kawai T, Cotter P, LoCascio SA, Morokata T, Dey BR, Tolkoff-Rubin NT, Preffer F, Bonnefoix T, Kattleman K, Spitzer TR, Sachs DH, Sykes M (2011). Mechanisms of donor-specific tolerance in recipients of haploidentical combined bone marrow/kidney transplantation. Am J Transplant, 11 (6), 1236-47.
Long-term follow-up of recipients of combined human leukocyte antigen-matched bone marrow and kidney transplantation for multiple myeloma with end-stage renal disease
(2011). Transplantation, 91 (6), 672-6. http://dx.doi.org/10.1097/TP.0b013e31820a3068, PMID: 21217460, PMCID: PMC3232059
Spitzer TR, Sykes M, Tolkoff-Rubin N, Kawai T, McAfee SL, Dey BR, Ballen K, Delmonico F, Saidman S, Sachs DH, Cosimi AB
[Reprint] [PubMed]
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Spitzer TR, Sykes M, Tolkoff-Rubin N, Kawai T, McAfee SL, Dey BR, Ballen K, Delmonico F, Saidman S, Sachs DH, Cosimi AB (2011). Long-term follow-up of recipients of combined human leukocyte antigen-matched bone marrow and kidney transplantation for multiple myeloma with end-stage renal disease. Transplantation, 91 (6), 672-6.
Per-channel basis normalization methods for flow cytometry data
(2010). Cytometry A, 77 (2), 121-31. http://dx.doi.org/10.1002/cyto.a.20823, PMID: 19899135, PMCID: PMC3648208
Hahne F, Khodabakhshi AH, Bashashati A, Wong CJ, Gascoyne RD, Weng AP, Seyfert-Margolis V, Bourcier K, Asare A, Lumley T, Gentleman R, Brinkman RR
[Reprint] [PubMed]
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Hahne F, Khodabakhshi AH, Bashashati A, Wong CJ, Gascoyne RD, Weng AP, Seyfert-Margolis V, Bourcier K, Asare A, Lumley T, Gentleman R, Brinkman RR (2010). Per-channel basis normalization methods for flow cytometry data. Cytometry A, 77 (2), 121-31.
Identification of a B cell signature associated with renal transplant tolerance in humans
(2010). J Clin Invest, 120 (6), 1836-47. http://dx.doi.org/10.1172/JCI39933, PMID: 20501946, PMCID: PMC2877933
Newell KA, Asare A, Kirk AD, Gisler TD, Bourcier K, Suthanthiran M, Burlingham WJ, Marks WH, Sanz I, Lechler RI, Hernandez-Fuentes MP, Turka LA, Seyfert-Margolis VL
[Reprint] [PubMed]
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Newell KA, Asare A, Kirk AD, Gisler TD, Bourcier K, Suthanthiran M, Burlingham WJ, Marks WH, Sanz I, Lechler RI, Hernandez-Fuentes MP, Turka LA, Seyfert-Margolis VL (2010). Identification of a B cell signature associated with renal transplant tolerance in humans. J Clin Invest, 120 (6), 1836-47.
Development of a cross-platform biomarker signature to detect renal transplant tolerance in humans
(2010). J Clin Invest, 120 (6), 1848-61. http://dx.doi.org/10.1172/JCI39922, PMID: 20501943, PMCID: PMC2877932
Sagoo P, Perucha E, Sawitzki B, Tomiuk S, Stephens DA, Miqueu P, Chapman S, Craciun L, Sergeant R, Brouard S, Rovis F, Jimenez E, Ballow A, Giral M, Rebollo-Mesa I, Le Moine A, Braudeau C, Hilton R, Gerstmayer B, Bourcier K, Sharif A, Krajewska M, Lord GM, Roberts I, Goldman M, Wood KJ, Newell K, Seyfert-Margolis V, Warrens AN, Janssen U, Volk HD, Soulillou JP, Hernandez-Fuentes MP, Lechler RI
[Reprint] [PubMed]
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Sagoo P, Perucha E, Sawitzki B, Tomiuk S, Stephens DA, Miqueu P, Chapman S, Craciun L, Sergeant R, Brouard S, Rovis F, Jimenez E, Ballow A, Giral M, Rebollo-Mesa I, Le Moine A, Braudeau C, Hilton R, Gerstmayer B, Bourcier K, Sharif A, Krajewska M, Lord GM, Roberts I, Goldman M, Wood KJ, Newell K, Seyfert-Margolis V, Warrens AN, Janssen U, Volk HD, Soulillou JP, Hernandez-Fuentes MP, Lechler RI (2010). Development of a cross-platform biomarker signature to detect renal transplant tolerance in humans. J Clin Invest, 120 (6), 1848-61.
Autoantigen-specific regulatory T cells induced in patients with type 1 diabetes mellitus by insulin B-chain immunotherapy
(2010). J Autoimmun, 34 (4), 408-15. http://dx.doi.org/10.1016/j.jaut.2009.10.005, PMID: 19931408, PMCID: PMC2860016
Orban T, Farkas K, Jalahej H, Kis J, Treszl A, Falk B, Reijonen H, Wolfsdorf J, Ricker A, Matthews JB, Tchao N, Sayre P, Bianchine P
[Reprint] [PubMed]
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Orban T, Farkas K, Jalahej H, Kis J, Treszl A, Falk B, Reijonen H, Wolfsdorf J, Ricker A, Matthews JB, Tchao N, Sayre P, Bianchine P (2010). Autoantigen-specific regulatory T cells induced in patients with type 1 diabetes mellitus by insulin B-chain immunotherapy. J Autoimmun, 34 (4), 408-15.
Rituximab versus cyclophosphamide for ANCA-associated vasculitis
(2010). New Eng J Med, 363 (3), 221-32. http://dx.doi.org/10.1056/NEJMoa090990, PMID: 20647199, PMCID: PMC3137658
Stone JH, Merkel PA, Spiera R, Seo P, Langford CA, Hoffman GS, Kallenberg CG, St. Clair EW, Turkiewicz A, Tchao NK, Webber L, Ding L, Sejismundo LP, Mieras K, Weitzenkamp D, Ikle D, Seyfert-Margolis V, Mueller M, Brunetta P, Allen NB, Fervenza FC, Geetha D, Keogh KA, Kissin EY, Monach PA, Peikert T, Stegeman C, Ytterberg SR, Specks U, RAVE-ITN Research Group
[Reprint] [PubMed]
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Stone JH, Merkel PA, Spiera R, Seo P, Langford CA, Hoffman GS, Kallenberg CG, St. Clair EW, Turkiewicz A, Tchao NK, Webber L, Ding L, Sejismundo LP, Mieras K, Weitzenkamp D, Ikle D, Seyfert-Margolis V, Mueller M, Brunetta P, Allen NB, Fervenza FC, Geetha D, Keogh KA, Kissin EY, Monach PA, Peikert T, Stegeman C, Ytterberg SR, Specks U, RAVE-ITN Research Group (2010). Rituximab versus cyclophosphamide for ANCA-associated vasculitis. New Eng J Med, 363 (3), 221-32.
Mixed chimerism, lymphocyte recovery, and evidence for early donor-specific unresponsiveness in patients receiving combined kidney and bone marrow transplantation to induce tolerance
(2010). Transplantation, 90 (12), 1607-15. http://dx.doi.org/10.1097/TP.0b013e3181ffbaff, PMID: 21085064, PMCID: PMC3059844
LoCascio SA, Morokata T, Chittenden M, Preffer FI, Dombkowski DM, Andreola G, Crisalli K, Kawai T, Saidman Sl, Spitzer TR, Tolkoff-Rubin N, Cosimi BA, Sachs DH, Sykes M
[Reprint] [PubMed]
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LoCascio SA, Morokata T, Chittenden M, Preffer FI, Dombkowski DM, Andreola G, Crisalli K, Kawai T, Saidman Sl, Spitzer TR, Tolkoff-Rubin N, Cosimi BA, Sachs DH, Sykes M (2010). Mixed chimerism, lymphocyte recovery, and evidence for early donor-specific unresponsiveness in patients receiving combined kidney and bone marrow transplantation to induce tolerance. Transplantation, 90 (12), 1607-15.
Validated protocol for FoxP3 reveals increased expression in type 1 diabetes patients
(2009). Cytometry B Clin Cytom, 72 (2), 69-78. http://dx.doi.org/10.1002/cyto.b.20446, PMID: 18690669
Grant J, Bourcier K, Wallace S, Pan D, Conway A, Seyfert-Margolis V, Wallace PK
[Reprint] [PubMed]
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Grant J, Bourcier K, Wallace S, Pan D, Conway A, Seyfert-Margolis V, Wallace PK (2009). Validated protocol for FoxP3 reveals increased expression in type 1 diabetes patients. Cytometry B Clin Cytom, 72 (2), 69-78.
Power enhancement via multivariate outlier testing with gene expression arrays
(2009). Bioinformatics, 25 (1), 48-53. http://dx.doi.org/10.1093/bioinformatics/btn591, PMID: 19015138, PMCID: PMC2638936
Asare A, Gao Z, Carey VJ, Wang R, Seyfert-Margolis V
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Asare A, Gao Z, Carey VJ, Wang R, Seyfert-Margolis V (2009). Power enhancement via multivariate outlier testing with gene expression arrays. Bioinformatics, 25 (1), 48-53.
Representing and Reasoning with Temporal Constraints in Clinical Trials Using Semantic Technologies
(2009). Biomedical Engineering Systems and Technologies Springer Berlin Heidelberg, Apr (78), Suppl 1:S77-85. http://dx.doi.org/10.1016/j.ijmedinf.2008.07.013, PMID: 18789876
Shankar RD, Martins SB, O'Connor MJ, Parrish DB, Das AK
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Shankar RD, Martins SB, O'Connor MJ, Parrish DB, Das AK (2009). Representing and Reasoning with Temporal Constraints in Clinical Trials Using Semantic Technologies. Biomedical Engineering Systems and Technologies Springer Berlin Heidelberg, Apr (78), Suppl 1:S77-85.
Early and limited use of tacrolimus to avoid rejection in an alemtuzumab and sirolimus regimen for kidney transplantation: clinical results and immune monitoring
(2009). Am J Transplant, 9 (5), 1087-98. http://dx.doi.org/10.1111/j.1600-6143.2009.02581.x, PMID: 19344431
Knechtle SJ, Pascual J, Bloom DD, Torrealba JR, Jankowska-Gan E, Burlingham WJ, Kwun J, Colvin RB, Seyfert-Margolis V, Bourcier K, Sollinger HW
[Reprint] [PubMed]
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Knechtle SJ, Pascual J, Bloom DD, Torrealba JR, Jankowska-Gan E, Burlingham WJ, Kwun J, Colvin RB, Seyfert-Margolis V, Bourcier K, Sollinger HW (2009). Early and limited use of tacrolimus to avoid rejection in an alemtuzumab and sirolimus regimen for kidney transplantation: clinical results and immune monitoring. Am J Transplant, 9 (5), 1087-98.
Treatment of patients with new onset Type 1 diabetes with a single course of anti-CD3 mAb Teplizumab preserves insulin production for up to 5 years
(2009). Clin Immunol, 132 (2), 166-73. http://dx.doi.org/10.1016/j.clim.2009.04.007, PMID: 19443276, PMCID: PMC2735402
Herold KC, Gitelman S, Greenbaum C, Puck J, Hagopian W, Gottlieb P, Sayre P, Bianchine P, Wong E, Seyfert-Margolis V, Bourcier K, Bluestone JA, ImmuneTolerance Network ITN007AI Study Group
[Reprint] [PubMed]
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Herold KC, Gitelman S, Greenbaum C, Puck J, Hagopian W, Gottlieb P, Sayre P, Bianchine P, Wong E, Seyfert-Margolis V, Bourcier K, Bluestone JA, ImmuneTolerance Network ITN007AI Study Group (2009). Treatment of patients with new onset Type 1 diabetes with a single course of anti-CD3 mAb Teplizumab preserves insulin production for up to 5 years. Clin Immunol, 132 (2), 166-73.
Single nucleotide transcription factor 7-like 2 (TCF7L2) gene polymorphisms in antiislet autoantibody-negative patients at onset of diabetes
(2009). J Clin Endocrinol Metab, 94 (2), 504-10. http://dx.doi.org/10.1210/jc.2007-2694, PMID: 19050058, PMCID: PMC2646512
Yu J, Steck AK, Babu S, Yu L, Miao D, McFann K, Hutton J, Eisenbarth GS, Klingensmith G
[Reprint] [PubMed]
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Yu J, Steck AK, Babu S, Yu L, Miao D, McFann K, Hutton J, Eisenbarth GS, Klingensmith G (2009). Single nucleotide transcription factor 7-like 2 (TCF7L2) gene polymorphisms in antiislet autoantibody-negative patients at onset of diabetes. J Clin Endocrinol Metab, 94 (2), 504-10.
Murine high specificity/sensitivity competitive europium insulin autoantibody assay
(2009). Diabetes Technol Ther, 11 (4), 227-33. http://dx.doi.org/10.1089/dia.2008.0072, PMID: 19344197, PMCID: PMC2903340
Babaya N, Liu E, Miao D, Li M, Yu L, Eisenbarth GS
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Babaya N, Liu E, Miao D, Li M, Yu L, Eisenbarth GS (2009). Murine high specificity/sensitivity competitive europium insulin autoantibody assay. Diabetes Technol Ther, 11 (4), 227-33.
Prerequisites for cytokine measurements in clinical trials with multiplex immunoassays
(2009). BMC Immunol, 28 (10), 52. http://dx.doi.org/10.1186/1471-2172-10-52, PMID: 19785746, PMCID: PMC2761376
de Jager W, Bourcier K, Rijkers GT, Prakken BJ, Seyfert-Margolis V
[Reprint] [PubMed]
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de Jager W, Bourcier K, Rijkers GT, Prakken BJ, Seyfert-Margolis V (2009). Prerequisites for cytokine measurements in clinical trials with multiplex immunoassays. BMC Immunol, 28 (10), 52.
B-cell immunity in the context of T-cell tolerance after combined kidney and bone marrow transplantation in humans
(2009). Am J Transplant, 9 (9), 2126-35. http://dx.doi.org/10.1111/j.1600-6143.2009.02738.x, PMID: 19624570, PMCID: PMC2837587
Porcheray F, Wong W, Saidman Sl, De Vito J, Girouard TC, Chittenden M, Shaffer J, Tolkoff-Rubin N, Dey BR, Spitzer TR, Colvin RB, Cosimi AB, Kawai T, Sachs DH, Sykes M, Zorn E
[Reprint] [PubMed]
[Citation View]
Porcheray F, Wong W, Saidman Sl, De Vito J, Girouard TC, Chittenden M, Shaffer J, Tolkoff-Rubin N, Dey BR, Spitzer TR, Colvin RB, Cosimi AB, Kawai T, Sachs DH, Sykes M, Zorn E (2009). B-cell immunity in the context of T-cell tolerance after combined kidney and bone marrow transplantation in humans. Am J Transplant, 9 (9), 2126-35.
HLA-Mismatched renal transplantation without maintenance immunosuppression
(2008). N Engl J Med, 358 (4), 353-61. http://dx.doi.org/10.1056/NEJMoa071074, PMID: 18216355, PMCID: PMC2819046
Kawai, T, Cosimi AB, Spitzer TR, Tolkoff-Rubin, N, Suthanthiran M, Saidman Sl, Shaffer J, Preffer FI, Ding R, Sharma V, Fishman JA, Dey B, Ko DSC, Hertl M, Goes NB, Wong W, Williams WW, Colvin RB, Sykes M, Sachs DH
[Reprint] [PubMed]
[Citation View]
Kawai, T, Cosimi AB, Spitzer TR, Tolkoff-Rubin, N, Suthanthiran M, Saidman Sl, Shaffer J, Preffer FI, Ding R, Sharma V, Fishman JA, Dey B, Ko DSC, Hertl M, Goes NB, Wong W, Williams WW, Colvin RB, Sykes M, Sachs DH (2008). HLA-Mismatched renal transplantation without maintenance immunosuppression. N Engl J Med, 358 (4), 353-61.
CTLA4Ig treatment in patients with multiple sclerosis: an open-label, phase 1 clinical trial
(2008). Neurology, 71 (12), 917-24. http://dx.doi.org/10.1212/01.wnl.0000325915.00112.61, PMID: 18794494
Viglietta V, Bourcier K, Buckle GJ, Healy B, Weiner HL, Hafler DA, Egorova S, Guttmann CRG, Rusche JR, Khoury SJ
[Reprint] [PubMed]
[Citation View]
Viglietta V, Bourcier K, Buckle GJ, Healy B, Weiner HL, Hafler DA, Egorova S, Guttmann CRG, Rusche JR, Khoury SJ (2008). CTLA4Ig treatment in patients with multiple sclerosis: an open-label, phase 1 clinical trial. Neurology, 71 (12), 917-24.
Grass pollen immunotherapy: IL-10 induction and suppression of late responses precedes IgG4 inhibitory antibody activity
(2008). J Allergy Clin Immunol, 121 (5), 1120-5. http://dx.doi.org/10.1016/j.jaci.2008.01.072, PMID: 18374405
Francis JN, James LK, Paraskevopoulos G, Wong C, Calderon MA, Durham SR, Till SJ
[Reprint] [PubMed]
[Citation View]
Francis JN, James LK, Paraskevopoulos G, Wong C, Calderon MA, Durham SR, Till SJ (2008). Grass pollen immunotherapy: IL-10 induction and suppression of late responses precedes IgG4 inhibitory antibody activity. J Allergy Clin Immunol, 121 (5), 1120-5.
Retrospective tissue typeing of the kidney donor from recipient urine
(2008). Kidney Int, 74 (7), 952-5. http://dx.doi.org/10.1038/ki.2008.340, PMID: 18633344
Srikantha M, Sergeant R, Khan T, Lechler RI, Davey N, Hernandez-Fuentes MP, Warrens AN
[Reprint] [PubMed]
[Citation View]
Srikantha M, Sergeant R, Khan T, Lechler RI, Davey N, Hernandez-Fuentes MP, Warrens AN (2008). Retrospective tissue typeing of the kidney donor from recipient urine. Kidney Int, 74 (7), 952-5.
Knowledge-data integration for temporal reasoning in a clinical trial system
(2008). Int J Med Inform, 78 (1), S77-85. http://dx.doi.org/10.1016/j.ijmedinf.2008.07.013, PMID: 18789876
O'Connor MJ, Shankar RD, Parrish DB, Das AK
[Reprint] [PubMed]
[Citation View]
O'Connor MJ, Shankar RD, Parrish DB, Das AK (2008). Knowledge-data integration for temporal reasoning in a clinical trial system. Int J Med Inform, 78 (1), S77-85.
MIFlowCyt: the minimum information about a Flow Cytometry Experiment
(2008). Cytometry, 73 (10), 926-30. http://dx.doi.org/10.1002/cyto.a.20623, PMID: 18752282, PMCID: PMC2773297
Lee JA, Spidlen J, Boyce K, Cai J, Crosbie N, Dalphin M, Furlong J, Gasparetto M, Goldberg M, Goralczyk EM, Hyun B, Jansen K, Kollmann T, Kong M, Leif R, McWeeney S, Moloshok TD, Moore W, Nolan G, Nolan J, Nikolich-Zugich J, Parrish D, Purcell B, Qian Y, Selvaraj B, Smith C, Tchuvatkina O, Wertheimer A, Wilkinson P, Wilson C, Wood J, Zigon R; International Society for Advancement of Cytometry Data Standards Task Force, Scheuermann RH, Brinkman RR
[Reprint] [PubMed]
[Citation View]
Lee JA, Spidlen J, Boyce K, Cai J, Crosbie N, Dalphin M, Furlong J, Gasparetto M, Goldberg M, Goralczyk EM, Hyun B, Jansen K, Kollmann T, Kong M, Leif R, McWeeney S, Moloshok TD, Moore W, Nolan G, Nolan J, Nikolich-Zugich J, Parrish D, Purcell B, Qian Y, Selvaraj B, Smith C, Tchuvatkina O, Wertheimer A, Wilkinson P, Wilson C, Wood J, Zigon R; International Society for Advancement of Cytometry Data Standards Task Force, Scheuermann RH, Brinkman RR (2008). MIFlowCyt: the minimum information about a Flow Cytometry Experiment. Cytometry, 73 (10), 926-30.
Differential gene expression profiles are dependent upon method of peripheral blood collection and RNA isolation
(2008). BMC Genomics, 10 (9), 474. http://dx.doi.org/10.1186/1471-2164-9-474, PMID: 18847473, PMCID: PMC2573897
Asare AL, Kolchinsky SA, Gao Z, Wang R, Raddassi K, Bourcier K, Seyfert-Margolis V
[Reprint] [PubMed]
[Citation View]
Asare AL, Kolchinsky SA, Gao Z, Wang R, Raddassi K, Bourcier K, Seyfert-Margolis V (2008). Differential gene expression profiles are dependent upon method of peripheral blood collection and RNA isolation. BMC Genomics, 10 (9), 474.
Long-term management of immunosuppression after pediatric liver transplantation: is minimization or withdrawal desirable or possible or both?
(2008). Curr Opin Organ Transplant, 13 (5), 506-12. http://dx.doi.org/10.1097/MOT.0b013e328310b0f7, PMID: 19060534, PMCID: PMC2727645
Feng S
[Reprint] [PubMed]
[Citation View]
Feng S (2008). Long-term management of immunosuppression after pediatric liver transplantation: is minimization or withdrawal desirable or possible or both?. Curr Opin Organ Transplant, 13 (5), 506-12.
B cell-directed therapies for autoimmune disease and correlates of disease response and relapse
(2008). J Allergy Clin Immunol, 121 (1), 13-21. http://dx.doi.org/10.1016/j.jaci.2007.11.030, PMID: 18206502
Levesque MC, St Clair EW.
[Reprint] [PubMed]
[Citation View]
Levesque MC, St Clair EW. (2008). B cell-directed therapies for autoimmune disease and correlates of disease response and relapse. J Allergy Clin Immunol, 121 (1), 13-21.
Human CD4+CD25low Adaptive T Regulatory Cells Suppress Delayed-Type Hypersensitivity during Transplant Tolerance
(2007). J Immunol, 178 (6), 3983-95. , PMID: 17339499
Xu Q, Lee J, Jankowska-Gan E, Schultz J, Roennburg DA, Haynes LD, Kusaka S, Sollinger HW, Knechtle SJ, Vanbuskirk AM, Torrealba JR, Burlingham WJ
[Reprint] [PubMed]
[Citation View]
Xu Q, Lee J, Jankowska-Gan E, Schultz J, Roennburg DA, Haynes LD, Kusaka S, Sollinger HW, Knechtle SJ, Vanbuskirk AM, Torrealba JR, Burlingham WJ (2007). Human CD4+CD25low Adaptive T Regulatory Cells Suppress Delayed-Type Hypersensitivity during Transplant Tolerance. J Immunol, 178 (6), 3983-95.
Dendritic cell type determines the mechanism of bystander suppression by adaptive T regulatory cells specific for the minor antigen HA-1
(2007). J Immunol, 179 (6), 3443-51. , PMID: 17785778
Derks RA, Jankowska-Gan E, Xu Q, Burlingham WJ
[Reprint] [PubMed]
[Citation View]
Derks RA, Jankowska-Gan E, Xu Q, Burlingham WJ (2007). Dendritic cell type determines the mechanism of bystander suppression by adaptive T regulatory cells specific for the minor antigen HA-1. J Immunol, 179 (6), 3443-51.
Combination treatment with omalizumab and rush immunotherapy for ragweed-induced allergic rhinitis: Inhibition of IgE-facilitated allergen binding
(2007). J Allergy Clin Immunol, 120 (3), 688-95. , PMID: 17631952
Klunker S, Saggar LR, Seyfert-Margolis V, Asare AL, Casale TB, Durham SR, Francis JN, Immune Tolerance Network Group
[Reprint] [PubMed]
[Citation View]
Klunker S, Saggar LR, Seyfert-Margolis V, Asare AL, Casale TB, Durham SR, Francis JN, Immune Tolerance Network Group (2007). Combination treatment with omalizumab and rush immunotherapy for ragweed-induced allergic rhinitis: Inhibition of IgE-facilitated allergen binding. J Allergy Clin Immunol, 120 (3), 688-95.
HLA-DPB1*0402 protects against type 1A diabetes autoimmunity in the highest risk DR3-DQB1*0201/DR4DQB1*0302 DAISY population
(2007). Diabetes, 56 (9), 2405-2409. , PMID: 17513705
Baschal EE, Aly TA, Babu SR, Fernando MS, Yu L, Miao D, Barriga KJ, Norris JM, Noble JA, Erlich HA, Rewers MJ, Eisenbarth GS
[Reprint] [PubMed]
[Citation View]
Baschal EE, Aly TA, Babu SR, Fernando MS, Yu L, Miao D, Barriga KJ, Norris JM, Noble JA, Erlich HA, Rewers MJ, Eisenbarth GS (2007). HLA-DPB1*0402 protects against type 1A diabetes autoimmunity in the highest risk DR3-DQB1*0201/DR4DQB1*0302 DAISY population. Diabetes, 56 (9), 2405-2409.
Accepting clocks that tell time poorly: fluid-phase versus standard ELISA autoantibody assays
(2007). Clin Immunol, 125 (2), 120-126. , PMID: 17904423, PMCID: PMC2104491
Liu E, Eisenbarth GS
[Reprint] [PubMed]
[Citation View]
Liu E, Eisenbarth GS (2007). Accepting clocks that tell time poorly: fluid-phase versus standard ELISA autoantibody assays. Clin Immunol, 125 (2), 120-126.
Prevelence of autoantibody-negative diabetes is not rare at all ages and increases with older age and obesity
(2007). J Clin Endocrinol, 92 (1), 88-92. , PMID: 17062766
Wang J, Miao D, Babu S, Yu J, Barker J, Klingensmith G, Rewers M, Eisenbarth GS, Yu L
[Reprint] [PubMed]
[Citation View]
Wang J, Miao D, Babu S, Yu J, Barker J, Klingensmith G, Rewers M, Eisenbarth GS, Yu L (2007). Prevelence of autoantibody-negative diabetes is not rare at all ages and increases with older age and obesity. J Clin Endocrinol, 92 (1), 88-92.
Anti-dsDNA antibody assay: high specificity and sensitivity with a filtration radioassay in comparison to low specificity with standard ELISA
(2007). J Rheumatol, 34 (4), 734-739. , PMID: 17407230
Yu L, Wang J, O'Dell JR, Oates J, Arend WP, Eisenbarth GS
[Reprint] [PubMed]
[Citation View]
Yu L, Wang J, O'Dell JR, Oates J, Arend WP, Eisenbarth GS (2007). Anti-dsDNA antibody assay: high specificity and sensitivity with a filtration radioassay in comparison to low specificity with standard ELISA. J Rheumatol, 34 (4), 734-739.